Those staples were from the original headliner. Your glass goes into the rubber and you insert the window into the frame of the quarter panel. The factory used like this caulking glaze that held it in place before they put the inside brackets on. I used dum dum it comes in a roll also known as mort tite.this works like window glaze but it's a putty. You should have 4 brackets 2 big ones on the bottom small on the top. Hope this helps